Difference between revisions of "Xpf"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | =The [[Xpf regulon]]= | + | =The [[Xpf regulon]]: ''[[xtmA]]-[[xtmB]]-[[xkdE]]-[[xkdF]]-[[xkdG]]-[[xkdH]]-[[xkdI]]-[[xkdJ]]-[[xkdK]]-[[xkdM]]''= |
=The gene= | =The gene= | ||
Revision as of 20:36, 10 December 2010
- Description: PBSX phage RNA polymerase sigma factor
| Gene name | xpf |
| Synonyms | pcf, ykxE |
| Essential | no |
| Product | PBSX phage RNA polymerase sigma factor |
| Function | transcription of PBSX genes |
| MW, pI | 19 kDa, 8.084 |
| Gene length, protein length | 507 bp, 169 aa |
| Immediate neighbours | xtrA, xtmA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
- 1 Categories containing this gene/protein
- 2 This gene is a member of the following regulons
- 3 The Xpf regulon: xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM
- 4 The gene
- 5 The protein
- 6 Expression and regulation
- 7 Biological materials
- 8 Labs working on this gene/protein
- 9 Your additional remarks
- 10 References
Categories containing this gene/protein
transcription, sigma factors and their control, PBSX prophage
This gene is a member of the following regulons
The Xpf regulon: xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM
The gene
Basic information
- Locus tag: BSU12560
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure:
- UniProt: P39784
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
G E McDonnell, H Wood, K M Devine, D J McConnell
Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis.
J Bacteriol: 1994, 176(18);5820-30
[PubMed:8083174]
[WorldCat.org]
[DOI]
(P p)
