Difference between revisions of "NagB"

From SubtiWiki
Jump to: navigation, search
Line 32: Line 32:
  
 
<br/><br/><br/><br/><br/><br/>
 
<br/><br/><br/><br/><br/><br/>
 +
 +
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[cell wall degradation/ turnover]]}},
 +
{{SubtiWiki category|[[utilization of specific carbon sources]]}}
 +
 +
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[YvoA regulon]]}}
  
 
=The gene=
 
=The gene=
Line 51: Line 58:
  
  
= Categories containing this gene/protein =
+
 
{{SubtiWiki category|[[cell wall degradation/ turnover]]}},
 
{{SubtiWiki category|[[utilization of specific carbon sources]]}}
 
 
=The protein=
 
=The protein=
  

Revision as of 23:47, 8 December 2010

  • Description: glucosamine-6-phosphate deaminase

Gene name nagB
Synonyms
Essential no
Product glucosamine-6-phosphate deaminase
Function N-acetylglucosamine utilization
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 26 kDa, 5.717
Gene length, protein length 726 bp, 242 aa
Immediate neighbours nagA, yvoA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
NagB context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

cell wall degradation/ turnover, utilization of specific carbon sources

This gene is a member of the following regulons

YvoA regulon

The gene

Basic information

  • Locus tag: BSU35020

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 (according to Swiss-Prot)
  • Protein family: NagB subfamily (according to Swiss-Prot)
  • Paralogous protein(s): GamA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References