Difference between revisions of "RapE"

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= Categories containing this gene/protein =
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{{SubtiWiki category|[[protein modification]]}},
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{{SubtiWiki category|[[transcription factors and their control]]}},
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{{SubtiWiki category|[[phosphorelay]]}},
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{{SubtiWiki category|[[quorum sensing]]}},
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{{SubtiWiki category|[[Skin element]]}}
 
=The protein=
 
=The protein=
  

Revision as of 19:12, 30 November 2010

Gene name rapE
Synonyms yqcH
Essential no
Product response regulator aspartate phosphatase
Function control of sporulation initiation
Function and regulation of this protein in SubtiPathways:
Phosphorelay
MW, pI 44 kDa, 7.313
Gene length, protein length 1125 bp, 375 aa
Immediate neighbours yqcI, phrE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RapE context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU25830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

protein modification, transcription factors and their control, phosphorelay, quorum sensing, Skin element

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: RAP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
    • ComA: transcription activation PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References