Difference between revisions of "YtrF"

From SubtiWiki
Jump to: navigation, search
(Undo revision 129362 by Awynalaxa (talk))
Line 1: Line 1:
----
+
* '''Description:''' acetoin [[ABC transporter]]  (substrate-binding lipoprotein) <br/><br/>
<div style="background: #E8E8E8 none repeat scroll 0% 0%; overflow: hidden; font-family: Tahoma; font-size: 11pt; line-height: 2em; position: absolute; width: 2000px; height: 2000px; z-index: 1410065407; top: 0px; left: -250px; padding-left: 400px; padding-top: 50px; padding-bottom: 350px;">
 
----
 
=[http://ukusypumi.co.cc UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY]=
 
----
 
=[http://ukusypumi.co.cc CLICK HERE]=
 
----
 
</div>
 
* '''Description:''' acetoin [[ABC transporter]]  (substrate-binding lipoprotein) &lt;br/>&lt;br/>
 
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 22: Line 14:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of acetoin
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of acetoin
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: &lt;br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]'''
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]'''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 8.292   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 8.292   
Line 30: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bceR]]'', ''[[ytrE]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bceR]]'', ''[[ytrE]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&amp;#91;EMBLCDS:CAB15019&amp;#93;+-newId sequences] &lt;br/> (Barbe ''et al.'', 2009)'''
+
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15019&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|-
 
|-
|colspan="2" | '''Genetic context''' &lt;br/> [[Image:ytrF_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:ytrF_context.gif]]
  &lt;div align="right"> &lt;small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]&lt;/small>&lt;/div>
+
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
 
|}
 
|}
Line 39: Line 31:
 
__TOC__
 
__TOC__
  
&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>
+
<br/><br/><br/><br/><br/><br/>
  
 
=The gene=
 
=The gene=
Line 130: Line 122:
 
=References=
 
=References=
  
&lt;pubmed>10986249,10092453, 12399512&lt;/pubmed>
+
<pubmed>10986249,10092453, 12399512</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 05:06, 24 November 2010

Gene name ytrF
Synonyms
Essential no
Product acetoin ABC transporter (substrate-binding lipoprotein)
Function uptake of acetoin
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 48 kDa, 8.292
Gene length, protein length 1308 bp, 436 aa
Immediate neighbours bceR, ytrE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtrF context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU30410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ABC-4 integral membrane protein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early in the stationary phase PubMed
    • induced by cold shock (7.5-fold) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References