Difference between revisions of "NrnA"
| Line 54: | Line 54: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' Adenosine 3',5'-bisphosphate + H<sub>2</sub>O = adenosine 5'-phosphate + phosphate (according to Swiss-Prot) oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase [http://www.ncbi.nlm.nih.gov/sites/entrez/17586819 PubMed] | + | * '''Catalyzed reaction/ biological activity:''' |
| + | ** Adenosine 3',5'-bisphosphate + H<sub>2</sub>O = adenosine 5'-phosphate + phosphate (according to Swiss-Prot) | ||
| + | ** oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase [http://www.ncbi.nlm.nih.gov/sites/entrez/17586819 PubMed] | ||
| + | ** hydrolyze oligo(deoxy)ribonucleotides in a 5'-3' direction {{PubMed|21087930}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 120: | Line 123: | ||
=References= | =References= | ||
| − | <pubmed>17586819,9387221 , 16479537, 19429620 19553197 </pubmed> | + | <pubmed>17586819,9387221 , 16479537, 19429620 19553197 21087930 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:00, 20 November 2010
- Description: oligoribonuclease (nanoRNase), 3',5'-bisphosphate nucleotidase
| Gene name | nrnA |
| Synonyms | ytqI |
| Essential | no |
| Product | oligoribonuclease (nanoRNase), 3',5'-bisphosphate nucleotidase |
| Function | degradation of RNA oligonucleotides, |
| MW, pI | 34 kDa, 4.668 |
| Gene length, protein length | 939 bp, 313 aa |
| Immediate neighbours | ytrI, ytpI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU29250
Phenotypes of a mutant
The mutant requires cysteine PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: Cytoplasm (Homogeneous) PubMed
Database entries
- Structure:
- UniProt: O34600
- KEGG entry: [3]
- E.C. number: 3.1.3.7
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
