Difference between revisions of "RpsO"
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* '''Interactions:''' | * '''Interactions:''' | ||
| + | ** [[23S rRNA]]-[[rpsO|S15]] {{PubMed|10497132}} | ||
* '''Localization:''' | * '''Localization:''' | ||
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=References= | =References= | ||
| − | <pubmed> 19633085 19653700 20418391 </pubmed> | + | <pubmed> 19633085 19653700 20418391 10497132</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:27, 17 October 2010
- Description: ribosomal protein
| Gene name | rpsO |
| Synonyms | |
| Essential | yes PubMed |
| Product | ribosomal protein S15 (BS18) |
| Function | translation |
| MW, pI | 10 kDa, 10.975 |
| Gene length, protein length | 267 bp, 89 aa |
| Immediate neighbours | ribC, pnpA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU16680
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ribosomal protein S15P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure: 1A32 (Geobacillus stearothermophilus)
- UniProt: P21473
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: rpsO PubMed
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Shiyi Yao, David H Bechhofer
Initiation of decay of Bacillus subtilis rpsO mRNA by endoribonuclease RNase Y.
J Bacteriol: 2010, 192(13);3279-86
[PubMed:20418391]
[WorldCat.org]
[DOI]
(I p)
Matthew A Lauber, William E Running, James P Reilly
B. subtilis ribosomal proteins: structural homology and post-translational modifications.
J Proteome Res: 2009, 8(9);4193-206
[PubMed:19653700]
[WorldCat.org]
[DOI]
(P p)
Shiyi Yao, David H Bechhofer
Processing and stability of inducibly expressed rpsO mRNA derivatives in Bacillus subtilis.
J Bacteriol: 2009, 191(18);5680-9
[PubMed:19633085]
[WorldCat.org]
[DOI]
(I p)
G M Culver, J H Cate, G Z Yusupova, M M Yusupov, H F Noller
Identification of an RNA-protein bridge spanning the ribosomal subunit interface.
Science: 1999, 285(5436);2133-6
[PubMed:10497132]
[WorldCat.org]
[DOI]
(P p)
