Difference between revisions of "CheD"
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[CheC]]-[[CheD]] | + | * '''Interactions:''' [[CheC]]-[[CheD]] {{PubMed|17908686}} |
* '''Localization:''' | * '''Localization:''' | ||
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** [[Spo0A]]: transcription repression {{PubMed|14651647}} | ** [[Spo0A]]: transcription repression {{PubMed|14651647}} | ||
** [[CodY]]: transcription repression {{PubMed|12730172}} | ** [[CodY]]: transcription repression {{PubMed|12730172}} | ||
| + | ** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 126: | Line 127: | ||
<pubmed>,18774298,,18990184</pubmed> | <pubmed>,18774298,,18990184</pubmed> | ||
==Original publications== | ==Original publications== | ||
| − | <pubmed>7893679,15317802,17908686,12011078,8866475,11722727,9194713,14651647, 9657996,8157612,15175317,16469702</pubmed> | + | <pubmed>7893679,15317802,17908686,12011078,8866475,11722727,9194713,14651647, 9657996,8157612,15175317,16469702 17850253</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:26, 31 July 2010
- Description: required for methylation of methyl-accepting chemotaxis proteins by CheR, enhances phosphatase activity of CheC
| Gene name | cheD |
| Synonyms | ylxK |
| Essential | no |
| Product | CheC activity modulator |
| Function | motility, chemotaxis |
| MW, pI | 17 kDa, 9.347 |
| Gene length, protein length | 498 bp, 166 aa |
| Immediate neighbours | cheC, sigD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU16460
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Protein L-glutamine + H2O = protein L-glutamate + NH3 (according to Swiss-Prot)
- Protein family: cheD family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure:
- UniProt: P40404
- KEGG entry: [3]
- E.C. number: 3.5.1.44
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Travis J Muff, George W Ordal
The diverse CheC-type phosphatases: chemotaxis and beyond.
Mol Microbiol: 2008, 70(5);1054-61
[PubMed:18990184]
[WorldCat.org]
[DOI]
(I p)
Christopher V Rao, George D Glekas, George W Ordal
The three adaptation systems of Bacillus subtilis chemotaxis.
Trends Microbiol: 2008, 16(10);480-7
[PubMed:18774298]
[WorldCat.org]
[DOI]
(P p)
Original publications
