Difference between revisions of "YfhE"
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=Expression and regulation= | =Expression and regulation= | ||
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* '''Operon:''' ''[[yhfF]]-[[yhfE]]-[[yhfD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfhFED.html DBTBS]) | * '''Operon:''' ''[[yhfF]]-[[yhfE]]-[[yhfD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfhFED.html DBTBS]) | ||
| − | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|15699190}}, [[SigB]] {{PubMed|15805528}} | + | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|12480901,15699190}}, [[SigB]] {{PubMed|15805528}} |
| − | * '''Regulation:''' induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | + | * '''Regulation:''' |
| + | ** induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | ||
| + | ** expressed early during sporulation in the forespore ([[SigF]]) {{PubMed|12480901,15699190}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 118: | Line 119: | ||
=References= | =References= | ||
| − | <pubmed>15805528, </pubmed> | + | <pubmed>15805528, 12480901,15699190</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:46, 8 July 2010
- Description: general stress protein, survival of salt and ethanol stresses and low temperatures
| Gene name | yfhE |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | survival of salt and ethanol stresses and low temperatures |
| MW, pI | 4 kDa, 10.568 |
| Gene length, protein length | 108 bp, 36 aa |
| Immediate neighbours | yfhD, yfhF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU08500
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O31573
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Ritsuko Kuwana, Yasuhiro Kasahara, Machiko Fujibayashi, Hiromu Takamatsu, Naotake Ogasawara, Kazuhito Watabe
Proteomics characterization of novel spore proteins of Bacillus subtilis.
Microbiology (Reading): 2002, 148(Pt 12);3971-3982
[PubMed:12480901]
[WorldCat.org]
[DOI]
(P p)
