Difference between revisions of "RplK"

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* '''Additional information:'''
 
* '''Additional information:'''
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** The mRNA has a long 5' leader region. This may indicate RNA-based regulation {{PubMed|20525796}}
  
 
=Biological materials =
 
=Biological materials =
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=References=
 
=References=
  
<pubmed>11244072, 19653700 20441189 </pubmed>
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<pubmed>11244072,11948165 19653700 20441189 20525796</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:09, 16 June 2010

Gene name rplK
Synonyms relC, tsp
Essential no
Product ribosomal protein L11 (BL11)
Function translation
MW, pI 14 kDa, 9.718
Gene length, protein length 423 bp, 141 aa
Immediate neighbours nusG, rplA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RplK context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU01020

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1FOX (C-terminal domain, Geobacillus stearothermophilus), 2FOW (RNA binding domain in complex with RNA, Geobacillus stearothermophilus)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:
    • The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References