Difference between revisions of "YxjF"
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| − | * '''Description:''' similar to gluconate 5-dehydrogenase <br/><br/> | + | * '''Description:''' sporulation protein, similar to gluconate 5-dehydrogenase <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 89: | Line 89: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[yxjC]]-[[scoA]]-[[scoB]]-[[yxjF]]'' {{PubMed|10746760}} | ||
| − | * ''' | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|12662922}} |
| − | * ''' | + | * '''Regulation:''' |
| − | + | ** repressed by glucose (4-fold) ([[CcpA]]) {{PubMed|12850135,10666464}} | |
| − | * | + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|12662922}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[CcpA]]: transcription repression {{PubMed|12850135,10666464}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 120: | Line 122: | ||
=References= | =References= | ||
| − | <pubmed>16672620,,12850135, </pubmed> | + | <pubmed>16672620,10666464 ,12850135,10746760 12662922 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:31, 7 February 2010
- Description: sporulation protein, similar to gluconate 5-dehydrogenase
| Gene name | yxjF |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 27 kDa, 7.89 |
| Gene length, protein length | 771 bp, 257 aa |
| Immediate neighbours | yxjG, scoB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU38970
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P42317
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant: GP1112 (spc), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
