Difference between revisions of "YxlD"
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| − | * '''Description:''' negative regulation of SigY-directed transcription of the ''[[sigY]]'' operon<br/><br/> | + | * '''Description:''' negative regulation of [[SigY]]-directed transcription of the ''[[sigY]]'' operon<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown | |style="background:#ABCDEF;" align="center"| '''Product''' || unknown | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || negative regulation of SigY-directed transcription of the ''[[sigY]]'' operon | + | |style="background:#ABCDEF;" align="center"|'''Function''' || negative regulation of [[SigY]]-directed transcription of the ''[[sigY]]'' operon |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 10.271 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 10.271 | ||
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[sigY]]-[[yxlC]]-[[yxlD]]-[[yxlE]]-[[yxlF]]-[[yxlG]]'' {{PubMed|14769884}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigY]] {{PubMed|12897008}} | |
| − | |||
| − | * ''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 10:39, 6 February 2010
| Gene name | yxlD |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | negative regulation of SigY-directed transcription of the sigY operon |
| MW, pI | 7 kDa, 10.271 |
| Gene length, protein length | 204 bp, 68 aa |
| Immediate neighbours | yxlE, yxlC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU38680
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P94372
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Shigeo Tojo, Masayuki Matsunaga, Takashi Matsumoto, Choong-Min Kang, Hirotake Yamaguchi, Kei Asai, Yoshito Sadaie, Ken-ichi Yoshida, Yasutaro Fujita
Organization and expression of the Bacillus subtilis sigY operon.
J Biochem: 2003, 134(6);935-46
[PubMed:14769884]
[WorldCat.org]
[DOI]
(P p)
Min Cao, Letal Salzberg, Ching Sung Tsai, Thorsten Mascher, Carla Bonilla, Tao Wang, Rick W Ye, Leticia Márquez-Magaña, John D Helmann
Regulation of the Bacillus subtilis extracytoplasmic function protein sigma(Y) and its target promoters.
J Bacteriol: 2003, 185(16);4883-90
[PubMed:12897008]
[WorldCat.org]
[DOI]
(P p)
