Difference between revisions of "YwlF"
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=Expression and regulation= | =Expression and regulation= | ||
− | + | * '''Operon:''' ''[[ywlF]]-[[ywlG]]'' {{PubMed|12823818}} | |
− | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
− | ** repressed in the absence of good nitrogen sources (glutamine or ammonium) ([[TnrA]]) | + | ** repressed in the absence of good nitrogen sources (glutamine or ammonium) ([[TnrA]]) {{PubMed|12823818}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | ** [[TnrA]]: transcription repression | + | ** [[TnrA]]: transcription repression {{PubMed|12823818}} |
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 19:52, 2 February 2010
- Description: ribose-5-phosphate isomerase
Gene name | ywlF |
Synonyms | ipc-32d |
Essential | no |
Product | ribose-5-phosphate isomerase |
Function | pentose phosphate pathway |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 16 kDa, 5.416 |
Gene length, protein length | 447 bp, 149 aa |
Immediate neighbours | ywlG, ywlE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU36920
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: lacAB/rpiB family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P39156
- KEGG entry: [3]
- E.C. number: 5.3.1.6
Additional information
The enzyme has probably more than one active site, but with no cooperativity described PubMed
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References