Difference between revisions of "Usd"
| Line 1: | Line 1: | ||
| − | * '''Description:''' putative spoIIID leader peptide <br/><br/> | + | * '''Description:''' putative ''[[spoIIID]]'' leader peptide <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || putative spoIIID leader peptide | + | |style="background:#ABCDEF;" align="center"| '''Product''' || putative ''[[spoIIID]]'' leader peptide |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || required for translation of | + | |style="background:#ABCDEF;" align="center"|'''Function''' || required for translation of [[SpoIIID]] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 4 kDa, 10.514 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 4 kDa, 10.514 | ||
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|9023218}} | |
| − | |||
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed| | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|9023218}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | <pubmed>,9023218, </pubmed> | + | <pubmed>,9023218, 7836311</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 22:42, 29 January 2010
- Description: putative spoIIID leader peptide
| Gene name | usd |
| Synonyms | |
| Essential | no |
| Product | putative spoIIID leader peptide |
| Function | required for translation of SpoIIID |
| MW, pI | 4 kDa, 10.514 |
| Gene length, protein length | 108 bp, 36 aa |
| Immediate neighbours | spoIIID, ywoH |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU36430
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O32276
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
A Decatur, M T McMurry, B N Kunkel, R Losick
Translation of the mRNA for the sporulation gene spoIIID of Bacillus subtilis is dependent upon translation of a small upstream open reading frame.
J Bacteriol: 1997, 179(4);1324-8
[PubMed:9023218]
[WorldCat.org]
[DOI]
(P p)
Y Abhayawardhane, G C Stewart
Bacillus subtilis possesses a second determinant with extensive sequence similarity to the Escherichia coli mreB morphogene.
J Bacteriol: 1995, 177(3);765-73
[PubMed:7836311]
[WorldCat.org]
[DOI]
(P p)
