Difference between revisions of "YrvO"

From SubtiWiki
Jump to: navigation, search
(Basic information/ Evolution)
Line 90: Line 90:
  
 
=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[cymR]]-[[yrvO]]-[[trmU]]'' {{PubMed|16885442}}
  
* '''Operon:''' ''[[cymR]]-[[yrvO]]-[[trmU]]''
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16885442}}
 
 
* '''[[Sigma factor]]:''' [[SigA]]
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 120: Line 120:
  
 
=References=
 
=References=
 
+
<pubmed>16885442 11948165 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:10, 26 November 2009

  • Description: similar to NifS protein homolog

Gene name yrvO
Synonyms nifS
Essential yes PubMed
Product unknown
Function unknown
MW, pI 41 kDa, 5.463
Gene length, protein length 1137 bp, 379 aa
Immediate neighbours trmU, cymR
Gene sequence (+200bp) Protein sequence
Genetic context
YrvO context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU27510

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References