Difference between revisions of "DynA"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''ypbR'' {{PubMed|8396117}}
 
 
* '''[[[[Sigma factor]]]]:'''  
 
  
 +
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|8396117}}
 +
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** repressed in the presence of iron ([[Fur]]) {{PubMed|8396117}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[Fur]]: transcription repression {{PubMed|8396117}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
 
+
<pubmed> 8396117</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:18, 26 October 2009

  • Description: unknown

Gene name ypbR
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 137 kDa, 5.724
Gene length, protein length 3579 bp, 1193 aa
Immediate neighbours ypbS, fbpC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YpbR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU22030

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of iron (Fur) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References