Difference between revisions of "YciC"
| Line 89: | Line 89: | ||
* '''Operon:''' | * '''Operon:''' | ||
| + | ** ''[[yciA]]-[[yciB]]-[[yciC]]'' {{PubMed|9811636}} | ||
| + | ** ''yciC'' {{PubMed|12426338}} | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| + | ** ''[[yciA]]'':[[SigA]] {{PubMed|12426338}} | ||
| + | ** ''[[yciC]]'':[[SigA]] {{PubMed|12426338}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** induced by zinc starvation ([[Zur]]) [ | + | ** ''[[yciA]]'': induced by zinc starvation ([[Zur]]) {{PubMed|12426338}} |
| + | ** ''[[yciC]]'': induced by zinc starvation ([[Zur]]) {{PubMed|12426338}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[Zur]]: transcription repression in the presence of zinc [ | + | ** ''[[yciA]]'': [[Zur]]: transcription repression in the presence of zinc {{PubMed|12426338}} |
| + | ** ''[[yciC]]'': [[Zur]]: transcription repression in the presence of zinc {{PubMed|12426338}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 121: | Line 127: | ||
=References= | =References= | ||
| − | <pubmed>12426338,9811636,18344368, | + | <pubmed>12426338,9811636,18344368,,18763711, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:12, 19 August 2009
- Description: putative metallochaperone
| Gene name | yciC |
| Synonyms | |
| Essential | no |
| Product | putative metallochaperone |
| Function | zinc uptake |
| MW, pI | 45 kDa, 4.399 |
| Gene length, protein length | 1191 bp, 397 aa |
| Immediate neighbours | yciB, yckA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU03360
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: cobW C-terminal domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: membrane associated PubMed
Database entries
- Structure:
- UniProt: P94400
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
John Helmann, Cornell University, USA Homepage
Your additional remarks
References
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Scott E Gabriel, Faith Miyagi, Ahmed Gaballa, John D Helmann
Regulation of the Bacillus subtilis yciC gene and insights into the DNA-binding specificity of the zinc-sensing metalloregulator Zur.
J Bacteriol: 2008, 190(10);3482-8
[PubMed:18344368]
[WorldCat.org]
[DOI]
(I p)
Ahmed Gaballa, Tao Wang, Rick W Ye, John D Helmann
Functional analysis of the Bacillus subtilis Zur regulon.
J Bacteriol: 2002, 184(23);6508-14
[PubMed:12426338]
[WorldCat.org]
[DOI]
(P p)
A Gaballa, J D Helmann
Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis.
J Bacteriol: 1998, 180(22);5815-21
[PubMed:9811636]
[WorldCat.org]
[DOI]
(P p)
