Difference between revisions of "CwlK"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' similar to L-alanoyl-D-glutamate peptidase <br/><br/>
+
* '''Description:''' peptidoglycan hydrolytic L,D-endopeptidase<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+
|style="background:#ABCDEF;" align="center"| '''Product''' || peptidoglycan hydrolytic L,D-endopeptidase
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || cell wall turnover
 
|style="background:#ABCDEF;" align="center"|'''Function''' || cell wall turnover
Line 72: Line 72:
 
* '''Interactions:'''
 
* '''Interactions:'''
  
* '''Localization:''' cell membrane (according to Swiss-Prot)
+
* '''Localization:''' cell membrane {{PubMed|17588176}}
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 19:48, 25 July 2009

  • Description: peptidoglycan hydrolytic L,D-endopeptidase

Gene name cwlK
Synonyms ycdD
Essential no
Product peptidoglycan hydrolytic L,D-endopeptidase
Function cell wall turnover
MW, pI 18 kDa, 5.66
Gene length, protein length 501 bp, 167 aa
Immediate neighbours ycdC, rapJ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcdD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU02810

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M15C family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Ciaran Condon, IBPC, Paris, France Homepage

Your additional remarks

References