Difference between revisions of "YydA"
| Line 78: | Line 78: | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TO0 1TO0] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TO0 1TO0] | ||
| − | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/Q45601 Q45601] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40230] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40230] | ||
Revision as of 15:26, 20 July 2009
- Description: unknown
| Gene name | yydA |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 17 kDa, 9.314 |
| Gene length, protein length | 477 bp, 159 aa |
| Immediate neighbours | yydB, yycS |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU40230
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine (according to Swiss-Prot)
- Protein family: RNA methyltransferase rlmH family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 1TO0
- UniProt: Q45601
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- [[Sigma factor]]:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
