Difference between revisions of "XylA"
| Line 82: | Line 82: | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1A0D 1A0D] (Geobacillus stearothermophilus) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1A0D 1A0D] (Geobacillus stearothermophilus) | ||
| − | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P04788 P04788] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU17600] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU17600] | ||
| − | * '''E.C. number:''' [http://www.expasy.org/enzyme/5.3.1.5 5.3.1.5] | + | * '''E.C. number:''' [http://www.expasy.org/enzyme/5.3.1.5 5.3.1.5] |
=== Additional information=== | === Additional information=== | ||
Revision as of 12:56, 20 July 2009
- Description: xylose isomerase
| Gene name | xylA |
| Synonyms | |
| Essential | no |
| Product | xylose isomerase |
| Function | utilization of xylan and xylose |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 50 kDa, 5.635 |
| Gene length, protein length | 1335 bp, 445 aa |
| Immediate neighbours | xylR, xylB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU17600
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-xylose = D-xylulose (according to Swiss-Prot)
- Protein family: xylose isomerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 1A0D (Geobacillus stearothermophilus)
- UniProt: P04788
- KEGG entry: [3]
- E.C. number: 5.3.1.5
Additional information
Expression and regulation
- Regulation: repressed by glucose (CcpA) , carbon catabolite repression (CcpA), induction by xylose (XylR)
- Regulatory mechanism: CcpA: transcription repression, CcpA: transcription repression, XylR: transcription repression
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Wolfgang Hillen, Erlangen University, Germany Homepage
Your additional remarks
References
