http://subtiwiki-test.uni-goettingen.de/wiki//api.php?action=feedcontributions&feedformat=atom&user=Eraspaud 2026-04-05T02:31:36Z User contributions MediaWiki 1.30.0 http://subtiwiki-test.uni-goettingen.de/wiki//index.php?title=Biofilm_formation&diff=209270 2016-07-04T16:39:36Z

<p>Eraspaud: /* Important original publications */</p> <hr /> <div>Biofilms are the result of the multicellular lifestyle of ''B. subtilis''. They are characterized by the formation of a matrix polysaccharide (poly-N-acetyl glucosamine as a major polysaccharide {{PubMed|26078454}}) and an amyloid-like protein, [[TasA]]. Correction of ''[[sfp]]'', ''[[epsC]]'','' [[swrAA]]'', and ''[[degQ]]'' as well as introduction of ''rapP'' from a plasmid present in NCIB3610 results in biofilm formation in ''B. subtilis'' 168 {{PubMed|21278284}}.<br /> <br /> <br /> {{CategoryTree<br /> |Parents=<br /> * 4. [[Lifestyles]]<br /> ** 4.1. [[Exponential and early post-exponential lifestyles]]<br /> |Neighbours=<br /> * 4.1.1. [[Motility and chemotaxis]]<br /> * 4.1.2. [[Swarming]]<br /> * 4.1.3. [[Sliding]]<br /> * 4.1.4. [[Biofilm formation]]<br /> * 4.1.5. [[Genetic competence]]<br /> |Related=<br /> [[SinR regulon]]<br /> |}}<br /> <br /> __TOC__<br /> &lt;br&gt;&lt;br&gt;&lt;br&gt;<br /> ==[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm formation in ''Subti''Pathways]==<br /> <br /> ==Labs working on biofilm formation==<br /> * [[Roberto Grau]]<br /> * [[Daniel Kearns]]<br /> * [[Roberto Kolter]]<br /> * [[Akos T Kovacs]]<br /> * [[Oscar Kuipers]]<br /> * [[Beth Lazazzera]]<br /> * [[Richard Losick]]<br /> * [[Eric Raspaud]]<br /> * [[Nicola Stanley-Wall]]<br /> * [[Jörg Stülke]]<br /> <br /> ==Key genes and operons involved in biofilm formation==<br /> * matrix polysaccharide synthesis {{PubMed|26078454}}: <br /> ** ''[[epsA]]-[[epsB]]-[[epsC]]-[[epsD]]-[[epsE]]-[[epsF]]-[[epsG]]-[[epsH]]-[[epsI]]-[[epsJ]]-[[epsK]]-[[epsL]]-[[epsM]]-[[epsN]]-[[epsO]]''<br /> **'' [[galE]]''<br /> * amyloid protein synthesis, secretion and assembly<br /> ** ''[[tapA]]-[[sipW]]-[[tasA]]''<br /> * repellent surface layer<br /> ** ''[[bslA]]''<br /> * regulation<br /> ** [[SlrR]]<br /> ** [[SlrA]]<br /> ** [[SinR]]<br /> ** [[SinI]]<br /> ** [[KinC]]<br /> ** [[KinD]]<br /> ** [[Spo0A]]<br /> ** [[PtkA]]<br /> ** [[TkmA]]<br /> ** [[PtpZ]]<br /> ** [[DegU]]<br /> ** [[DegQ]]<br /> ** [[YmdB]]<br /> ** [[FtsH]]<br /> ** [[Veg]]<br /> ** [[MstX]]<br /> ** [[YugO]]<br /> <br /> * other proteins required for biofilm formation<br /> ** [[AmpS]]<br /> ** [[FloT]]<br /> ** [[LuxS]]<br /> ** [[RemA]]<br /> ** [[RemB]]<br /> ** [[Rny]]<br /> ** [[Sfp/1]]<br /> ** [[Sfp/2]]<br /> ** [[SpeA]]<br /> ** [[SpeD]]<br /> ** [[SwrAA]]<br /> ** [[YisP]]<br /> ** [[YlbF]]<br /> ** [[YmcA]]<br /> ** [[YvcA]]<br /> ** [[YwcC]]<br /> ** [[YxaB]]<br /> <br /> * other proteins required for efficient pellicle biofilm formation (mutant is out-competed by wild type)<br /> ** [[Hag]]<br /> ** [[FlgE]]<br /> ** [[FliF]]<br /> ** [[MotA]]<br /> ** [[SigD]]<br /> ** [[CheA]]<br /> ** [[CheY]]<br /> ** [[CheD]]<br /> ** [[CheV]]<br /> ** [[HemAT]]<br /> <br /> ==Important original publications==<br /> &lt;pubmed&gt; 26122431, 26588577, 26152584, 26078454 25870300 26060272 25825426 23271809, 23300252 21267464 21278284 16091050 22232655 22371091 23341623 23406351 25768534 23012477,22934631 23517761 23569226 23564171 25035996 23637960 23645570 24256735 25422306 25680358 25713360 25894589 26200335 26873313&lt;/pubmed&gt;<br /> <br /> ==Key reviews==<br /> &lt;pubmed&gt;16787201,24771632, 9891794,19054118,20890834,21109420,20519345,18381896 22024380 20735481 23353768 23791621 23927648 24384602 24909922 26104716 24988880 24608334 25907113&lt;/pubmed&gt;<br /> <br /> =Back to [[categories]]=</div>

Eraspaud http://subtiwiki-test.uni-goettingen.de/wiki//index.php?title=Biofilm_formation&diff=209269 2016-07-04T16:37:46Z

<p>Eraspaud: /* Labs working on biofilm formation */</p> <hr /> <div>Biofilms are the result of the multicellular lifestyle of ''B. subtilis''. They are characterized by the formation of a matrix polysaccharide (poly-N-acetyl glucosamine as a major polysaccharide {{PubMed|26078454}}) and an amyloid-like protein, [[TasA]]. Correction of ''[[sfp]]'', ''[[epsC]]'','' [[swrAA]]'', and ''[[degQ]]'' as well as introduction of ''rapP'' from a plasmid present in NCIB3610 results in biofilm formation in ''B. subtilis'' 168 {{PubMed|21278284}}.<br /> <br /> <br /> {{CategoryTree<br /> |Parents=<br /> * 4. [[Lifestyles]]<br /> ** 4.1. [[Exponential and early post-exponential lifestyles]]<br /> |Neighbours=<br /> * 4.1.1. [[Motility and chemotaxis]]<br /> * 4.1.2. [[Swarming]]<br /> * 4.1.3. [[Sliding]]<br /> * 4.1.4. [[Biofilm formation]]<br /> * 4.1.5. [[Genetic competence]]<br /> |Related=<br /> [[SinR regulon]]<br /> |}}<br /> <br /> __TOC__<br /> &lt;br&gt;&lt;br&gt;&lt;br&gt;<br /> ==[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm formation in ''Subti''Pathways]==<br /> <br /> ==Labs working on biofilm formation==<br /> * [[Roberto Grau]]<br /> * [[Daniel Kearns]]<br /> * [[Roberto Kolter]]<br /> * [[Akos T Kovacs]]<br /> * [[Oscar Kuipers]]<br /> * [[Beth Lazazzera]]<br /> * [[Richard Losick]]<br /> * [[Eric Raspaud]]<br /> * [[Nicola Stanley-Wall]]<br /> * [[Jörg Stülke]]<br /> <br /> ==Key genes and operons involved in biofilm formation==<br /> * matrix polysaccharide synthesis {{PubMed|26078454}}: <br /> ** ''[[epsA]]-[[epsB]]-[[epsC]]-[[epsD]]-[[epsE]]-[[epsF]]-[[epsG]]-[[epsH]]-[[epsI]]-[[epsJ]]-[[epsK]]-[[epsL]]-[[epsM]]-[[epsN]]-[[epsO]]''<br /> **'' [[galE]]''<br /> * amyloid protein synthesis, secretion and assembly<br /> ** ''[[tapA]]-[[sipW]]-[[tasA]]''<br /> * repellent surface layer<br /> ** ''[[bslA]]''<br /> * regulation<br /> ** [[SlrR]]<br /> ** [[SlrA]]<br /> ** [[SinR]]<br /> ** [[SinI]]<br /> ** [[KinC]]<br /> ** [[KinD]]<br /> ** [[Spo0A]]<br /> ** [[PtkA]]<br /> ** [[TkmA]]<br /> ** [[PtpZ]]<br /> ** [[DegU]]<br /> ** [[DegQ]]<br /> ** [[YmdB]]<br /> ** [[FtsH]]<br /> ** [[Veg]]<br /> ** [[MstX]]<br /> ** [[YugO]]<br /> <br /> * other proteins required for biofilm formation<br /> ** [[AmpS]]<br /> ** [[FloT]]<br /> ** [[LuxS]]<br /> ** [[RemA]]<br /> ** [[RemB]]<br /> ** [[Rny]]<br /> ** [[Sfp/1]]<br /> ** [[Sfp/2]]<br /> ** [[SpeA]]<br /> ** [[SpeD]]<br /> ** [[SwrAA]]<br /> ** [[YisP]]<br /> ** [[YlbF]]<br /> ** [[YmcA]]<br /> ** [[YvcA]]<br /> ** [[YwcC]]<br /> ** [[YxaB]]<br /> <br /> * other proteins required for efficient pellicle biofilm formation (mutant is out-competed by wild type)<br /> ** [[Hag]]<br /> ** [[FlgE]]<br /> ** [[FliF]]<br /> ** [[MotA]]<br /> ** [[SigD]]<br /> ** [[CheA]]<br /> ** [[CheY]]<br /> ** [[CheD]]<br /> ** [[CheV]]<br /> ** [[HemAT]]<br /> <br /> ==Important original publications==<br /> &lt;pubmed&gt; 26122431, 26152584, 26078454 25870300 26060272 25825426 23271809, 23300252 21267464 21278284 16091050 22232655 22371091 23341623 23406351 25768534 23012477,22934631 23517761 23569226 23564171 25035996 23637960 23645570 24256735 25422306 25680358 25713360 25894589 26200335 26873313&lt;/pubmed&gt;<br /> <br /> ==Key reviews==<br /> &lt;pubmed&gt;16787201,24771632, 9891794,19054118,20890834,21109420,20519345,18381896 22024380 20735481 23353768 23791621 23927648 24384602 24909922 26104716 24988880 24608334 25907113&lt;/pubmed&gt;<br /> <br /> =Back to [[categories]]=</div>

Eraspaud http://subtiwiki-test.uni-goettingen.de/wiki//index.php?title=Labs_working_on_Bacillus&diff=209268 2016-07-04T16:27:09Z

<p>Eraspaud: </p> <hr /> <div>==If you don't find your own lab, please feel free to add a page==<br /> <br /> For help, see the [http://www.subtiwiki.uni-goettingen.de/otherFiles/tutorial.pps tutorial] or [mailto:jstuelk@gwdg.de ask us]<br /> <br /> ==This is a partial list of groups working with ''Bacillus subtilis''==<br /> <br /> * [[Alessandra Albertini]]<br /> * [[Juan C. Alonso]]<br /> * [[Josef Altenbuchner]]<br /> * [[Haike Antelmann]]<br /> * [[Wayne Anderson]]<br /> * [[Arthur Aronson]]<br /> * [[Stephane Aymerich]]<br /> * [[Gert Bange]]<br /> * [[Imrich Barak]]<br /> * [[Dörte Becher]]<br /> * [[David Bechhofer]]<br /> * [[Melanie Barker Berkmen]]<br /> * [[Sigal Ben-Yehuda]]<br /> * [[Philippe Bessières]]<br /> * [[Marc Bramkamp]]<br /> * [[Sabine Brantl]]<br /> * [[Trygve Brautaset]]<br /> * [[Erhard Bremer]]<br /> * [[Richard Brennan]]<br /> * [[Romain Briandet]]<br /> * [[Bill Burkholder]]<br /> * [[Rut Carballido-Lopez]]<br /> * [[Fabian Commichau]]<br /> * [[Ciaran Condon]]<br /> * [[Simon Cutting]]<br /> * [[Richard Daniel]]<br /> * [[Diego de Mendoza]]<br /> * [[Isabel de Sa-Nogueira]]<br /> * [[Nathalie Declerck]]<br /> * [[Emma Denham]]<br /> * [[Kevin Devine]]<br /> * [[Josef Deutscher]]<br /> * [[Jan Maarten van Dijl]]<br /> * [[Mark Dillingham]]<br /> * [[Adam Driks]]<br /> * [[David Dubnau]]<br /> * [[Jonathan Dworkin]]<br /> * [[Patrick Eichenberger]]<br /> * [[Craig Ellermeier]]<br /> * [[Michael Elowitz]]<br /> * [[Jeff Errington]]<br /> * [[Eugenio Ferrari]]<br /> * [[Carol Fierke]]<br /> * [[Susan Fisher]]<br /> * [[Maryline Foglino]]<br /> * [[Karl Forchhammer]]<br /> * [[Simon Foster]]<br /> * [[Vincent Fromion]]<br /> * [[Masaya Fujita]]<br /> * [[Yasutaro Fujita]]<br /> * [[Anne Galinier]]<br /> * [[Alessandro Galizzi]]<br /> * [[Susanne Gebhard]]<br /> * [[Ulf Gerth]]<br /> * [[Boris Görke]]<br /> * [[Christophe Grangeasse]]<br /> * [[Peter Graumann]]<br /> * [[Carol Gross]]<br /> * [[Alan Grossman]]<br /> * [[Sven Halbedel]]<br /> * [[Bill Haldenwang]]<br /> * [[Leendert Hamoen]]<br /> * [[Liz Harry]]<br /> * [[Elisabeth Härtig]]<br /> * [[Roland Hartmann]]<br /> * [[Colin Harwood]]<br /> * [[Michael Hecker]]<br /> * [[Lars Hederstedt]]<br /> * [[John Helmann]]<br /> * [[Tina Henkin]]<br /> * [[Adriano Henriques]]<br /> * [[Christopher Henry]]<br /> * [[Jennifer Herman]]<br /> * [[Wolfgang Hillen]]<br /> * [[Jim Hoch]]<br /> * [[Marion Hulett]]<br /> * [[Oleg Igoshin]]<br /> * [[Mitsuhiro Itaya]]<br /> * [[Koreaki Ito]]<br /> * [[Laurent Janniere]]<br /> * [[Hanne Jarmer]]<br /> * [[Mark J. Jedrzejas]]<br /> * [[Bernard Joris]]<br /> * [[Matthieu Jules]]<br /> * [[Fujio Kawamura]]<br /> * [[Daniel Kearns]]<br /> * [[Dagmar Klostermeier]]<br /> * [[Anne-Brit Kolsto]]<br /> * [[Roberto Kolter]]<br /> * [[Vesa Kontinen]]<br /> * [[Akos T Kovacs]]<br /> * [[Libor Krasny]]<br /> * [[Lee Kroos]]<br /> * [[Oscar Kuipers]]<br /> * [[Michael Lalk]]<br /> * [[Beth Lazazzera]]<br /> * [[Peter Lewis]]<br /> * [[Rick Lewis]]<br /> * [[Daniel Lopez]]<br /> * [[Richard Losick]]<br /> * [[Charles Lovett]]<br /> * [[Shawn MacLellan]]<br /> * [[Ulrike Mäder]]<br /> * [[Ines Mandic-Mulec]]<br /> * [[Mohamed Marahiel]]<br /> * [[Isabelle Martin-Verstraete]]<br /> * [[Thorsten Mascher]]<br /> * [[Christoph Mayer]]<br /> * [[Friedhelm Meinhardt]]<br /> * [[Ivan Mijakovic]]<br /> * [[Ralf Moeller]]<br /> * [[Anne Moir]]<br /> * [[Charles Moran]]<br /> * [[Tarek Msadek]]<br /> * [[Michiko Nakano]]<br /> * [[Sylvie Nessler]]<br /> * [[Wayne Nicholson]]<br /> * [[Philippe Noirot]]<br /> * [[Michal Obuchowski]]<br /> * [[Naotake Ogasawara]]<br /> * [[Ole Økstad]]<br /> * [[George Ordal]]<br /> * [[Mario Pedraza-Reyes]]<br /> * [[Marta Perego]]<br /> * [[John Perkins]]<br /> * [[Patrick Piggot]]<br /> * [[Kit Pogliano]]<br /> * [[David Popham]]<br /> * [[Zoltan Pragai‎]]<br /> * [[Chet Price]]<br /> * [[Harald Putzer]]<br /> * [[Kumaran Ramamurthi]]<br /> * [[Eric Raspaud]]<br /> * [[Eduardo Robleto]]<br /> * [[David Rudner]]<br /> * [[Milton H. Saier]]<br /> * [[Margarita Salas]]<br /> * [[Uwe Sauer]]<br /> * [[Maria Schumacher]]<br /> * [[Wolfgang Schumann]]<br /> * [[Gerald Seidel]]<br /> * [[Junichi Sekiguchi]]<br /> * [[Peter Setlow]]<br /> * [[Irmgard Sinning]]<br /> * [[Linc Sonenshein]]<br /> * [[Panos Soultanas]]<br /> * [[George Spiegelman]]<br /> * [[Nicola Stanley-Wall]]<br /> * [[Jörg Stelling]]<br /> * [[Paul Straight]]<br /> * [[Mark Strauch]]<br /> * [[Jörg Stülke]]<br /> * [[Robert Switzer]]<br /> * [[Hendrik Szurmant]]<br /> * [[Gürol M. Süel]]<br /> * [[Kürsad Turgay]]<br /> * [[User:Jwveening |Jan-Willem Veening]]<br /> * [[Dennis Vitkup]]<br /> * [[Uwe Völker]]<br /> * [[Claes von Wachenfeldt]]<br /> * [[Thomas Wiegert]]<br /> * [[Tony Wilkinson]]<br /> * [[Wade Winkler]]<br /> * [[Christoph Wittmann]]<br /> * [[Ronald Yasbin]]<br /> * [[Ken-ichi Yoshida]]<br /> * [[Daniel R. Zeigler]]<br /> * [[Peter Zuber]]</div>

Eraspaud