http://subtiwiki-test.uni-goettingen.de/wiki//api.php?action=feedcontributions&feedformat=atom&user=83.145.227.132&*
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2026-04-04T07:04:32Z
User contributions
MediaWiki 1.30.0
http://subtiwiki-test.uni-goettingen.de/wiki//index.php?title=YtvA&diff=160675
YtvA
2012-04-18T20:23:07Z
<p>83.145.227.132: /* This gene is a member of the following regulons */</p>
<hr />
<div>* '''Description:''' positive regulation of [[SigB]] activity under conditions of blue light <br/><br/><br />
<br />
{| align="right" border="1" cellpadding="2" <br />
|-<br />
|style="background:#ABCDEF;" align="center"|'''Gene name'''<br />
|''ytvA''<br />
|-<br />
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''<br />
|-<br />
|style="background:#ABCDEF;" align="center"| '''Essential''' || no <br />
|-<br />
|style="background:#ABCDEF;" align="center"| '''Product''' || blue light receptor, flavoprotein <br />
|-<br />
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigB]] activity<br />
|-<br />
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 4.69 <br />
|-<br />
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 783 bp, 261 aa <br />
|-<br />
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytvB]]'', ''[[yttB]]''<br />
|-<br />
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15012&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''<br />
|-<br />
|colspan="2" | '''Genetic context''' <br/> [[Image:ytvA_context.gif]]<br />
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div><br />
|-<br />
|}<br />
<br />
__TOC__<br />
<br />
<br/><br/><br />
<br />
= [[Categories]] containing this gene/protein =<br />
{{SubtiWiki category|[[sigma factors and their control]]}}<br />
<br />
zk7bju <a href="http://sjmpgpynhkro.com/">sjmpgpynhkro</a>, [url=http://mrnfhgdyotth.com/]mrnfhgdyotth[/url], [link=http://drahrwuytiqo.com/]drahrwuytiqo[/link], http://qkqsgihpdnmx.com/<br />
<br />
=The gene=<br />
<br />
=== Basic information ===<br />
<br />
* '''Locus tag:''' BSU30340<br />
<br />
===Phenotypes of a mutant ===<br />
<br />
=== Database entries ===<br />
<br />
* '''DBTBS entry:''' no entry<br />
<br />
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13928]<br />
<br />
=== Additional information===<br />
<br />
=The protein=<br />
<br />
=== Basic information/ Evolution ===<br />
<br />
* '''Catalyzed reaction/ biological activity:''' <br />
<br />
* '''Protein family:'''<br />
<br />
* '''Paralogous protein(s):''' [[RsbR]], [[RsbRB]], [[RsbRC]], [[RsbRD]], [[YtvA]]<br />
<br />
=== Extended information on the protein ===<br />
<br />
* '''Kinetic information:''' <br />
<br />
* '''Domains:''' LOV domain, STAS domain<br />
<br />
* '''Modification:'''<br />
<br />
* '''Cofactor(s):''' FMN<br />
<br />
* '''Effectors of protein activity:'''<br />
** [[YtvA]]-dependent light activation of the [[SigB]] stress response is positively and negatively regulated by [[RsbRA]] and [[RsbRB]], respectively {{PubMed|22287516}}<br />
<br />
* '''Interactions:''' forms dimers {{PubMed|20800068}} <br />
<br />
* '''Localization:'''<br />
<br />
=== Database entries ===<br />
<br />
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2PR5 2PR5] (dark), [http://www.rcsb.org/pdb/explore.do?structureId=2PR6 2PR6] (light) <br />
<br />
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34627 O34627]<br />
<br />
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30340]<br />
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* '''E.C. number:'''<br />
<br />
=== Additional information===<br />
<br />
=Expression and regulation=<br />
<br />
* '''Operon:''' <br />
<br />
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytvA_3106210_3106995_1 ytvA] {{PubMed|22383849}}<br />
<br />
* '''Sigma factor:''' <br />
<br />
* '''Regulation:''' <br />
** induced under conditions of disulfide stress ([[Spx]]) {{PubMed|16923906}} <br />
<br />
* '''Regulatory mechanism:''' <br />
** [[Spx]]: transcription activation {{PubMed|16923906}}<br />
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* '''Additional information:'''<br />
<br />
=Biological materials =<br />
<br />
* '''Mutant:'''<br />
<br />
* '''Expression vector:'''<br />
<br />
* '''lacZ fusion:'''<br />
<br />
* '''GFP fusion:'''<br />
<br />
* '''two-hybrid system:''' <br />
<br />
* '''Antibody:'''<br />
<br />
=Labs working on this gene/protein=<br />
<br />
* [[Chet Price]], Davis, USA [http://foodscience.ucdavis.edu/price_lab/pricelab.html homepage]<br />
<br />
=Your additional remarks=<br />
<br />
=References=<br />
==Reviews==<br />
'''Additional reviews:''' {{PubMed|21822294}} <br />
<pubmed>18400553 </pubmed><br />
<br />
==Original publications==<br />
'''Additional publications:''' {{PubMed|21259411,21388385,21410163,21851109,22287516}} <br />
<pubmed> 19581299 16923906,17575448, 17764689, 17443319 17200735 16923909 16797012 16022561 15339223 11964249 11157946 19891470 20062844 19783626 20800068 22247770</pubmed><br />
<br />
[[Category:Protein-coding genes]]</div>
83.145.227.132