Targets of the Y complex
RNAs that require the Y complex for processing by RNase Y
mRNAs directly cleaved by RNase Y
- processing of the gapA operon mRNA between cggR and gapA (cggR-gapA-pgk-tpi-pgm-eno), requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ATPase operon mRNA between atpI and atpB (atpI-atpB-atpE-atpF-atpH-atpA-atpG-atpD-atpC), requires the YmcA-YlbF-YaaT complex PubMed
- processing of the dacA-pdxS-pdxT-serS mRNA upstream of dacA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ddl-murF mRNA upstream of ddl, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the yfjN leader mRNA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the glnR-glnA operon mRNA between glnR and glnA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the menA leader mRNA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the metN-metP-metQ operon mRNA between metP and metQ, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ydiG-rex-tatAY-tatCY operon mRNA between rex and tatAY, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the rplGB-rpsL-rpsG-fusA-tufA operon mRNA between rplGB and rpsL, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the rpoB-rpoC leader mRNA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the rpoE-pyrG operon mRNA between rpoE and pyrG, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ruvA-ruvB-yrzS-queA-tgt-yrbF operon mRNA between tgt and yrbF, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the tagA-tagB mRNA upstream of tagA, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ybfG-ybfF-ybfE operon mRNA between ybfG and ybfF, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the ylxM-ffh-rpsP-ylqC-ylqD-rimM-trmD-rplS operon mRNA between ffh and rpsP, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the yonR-yonS operon mRNA between yonR and yonS, requires the YmcA-YlbF-YaaT complex PubMed
- processing of the yqhL leader mRNA PubMed
- processing of the ywzH-dltA-dltB-dltC-dltD-dltE operon mRNA between ywzH and dltA, requires the YmcA-YlbF-YaaT complex PubMed
- initiates the degradation of rpsO, requires the YmcA-YlbF-YaaT complex mRNA PubMed
- infC-rpmI-rplT mRNA, requires the YmcA-YlbF-YaaT complex PubMed
- leader of the cwlO mRNA, requires the YmcA-YlbF-YaaT complex PubMed
Riboswitch RNAs cleaved by RNase Y
- the S-box riboswitch RNAs in vivo and in vitro PubMed
- hisS, requires the YmcA-YlbF-YaaT complex PubMed
- ileS, requires the YmcA-YlbF-YaaT complex PubMed
- nupG, requires the YmcA-YlbF-YaaT complex PubMed
- thrS, requires the YmcA-YlbF-YaaT complex PubMed
- thrZ, requires the YmcA-YlbF-YaaT complex PubMed
- trpS, requires the YmcA-YlbF-YaaT complex PubMed
- tyrS, requires the YmcA-YlbF-YaaT complex PubMed
